C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP/GTP binding protein-like 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029165 Agbl5 10090 + 5:30888694-30906965 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031057 Agbl5-003 30888935-30906965 protein_coding
  ENSMUST00000046182 Agbl5-010 30888969-30896084 protein_coding
  ENSMUST00000061213 Agbl5-007 30888974-30903487 protein_coding
  ENSMUST00000069705 Agbl5-009 30888852-30896687 protein_coding
  ENSMUST00000114696 Agbl5-006 30889006-30903487 protein_coding
  ENSMUST00000114700 Agbl5-004 30889006-30906666 protein_coding
  ENSMUST00000114704 Agbl5-001 30888969-30906666 protein_coding
  ENSMUST00000124908 Agbl5-008 30889326-30891869 protein_coding
  ENSMUST00000128744 Agbl5-012 30888694-30891207 protein_coding
  ENSMUST00000134956 Agbl5-005 30888956-30906667 retained_intron
  ENSMUST00000136715 Agbl5-002 30889001-30906666 nonsense_mediated_decay
  ENSMUST00000147149 Agbl5-014 30894204-30896094 retained_intron
  ENSMUST00000148394 Agbl5-011 30888941-30893833 retained_intron
  ENSMUST00000150075 Agbl5-013 30890282-30892447 processed_transcript
  ENSMUST00000151117 Agbl5-015 30895933-30905910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000031057ENSMUST00000046182ENSMUST00000061213ENSMUST00000114696ENSMUST00000148394ENSMUST00000150075
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000031057 N/A N/A 4.951±0.00 N/A N/A
ENSMUST00000046182 N/A N/A 8.418±0.00 3.664±0.00 64.888±14.59
ENSMUST00000061213 4.162±0.20 8.176±1.45 5.188±0.09 N/A N/A
ENSMUST00000114696 N/A N/A N/A N/A 57.591±4.21
ENSMUST00000148394 N/A 4.446±0.66 4.376±0.00 N/A N/A
ENSMUST00000150075 N/A N/A N/A 13.428±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004K CIL_00004K_0002 CGP 5:30869579-30906965
CIL_00004D CIL_00004D_0002 CGP 5:30888694-30907788

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0035608 IDA protein deglutamylation
GO:0035611 IDA protein branching point deglutamylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045900 agbl5 ATP/GTP binding protein-like 5 protein_coding Danio_rerio
ENSG00000084693 AGBL5 ATP/GTP binding protein-like 5 protein_coding Homo_sapiens

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