C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029504 Ddx51 10090 + 5:110653451-110660496 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031478 Ddx51-001 110653451-110660496 protein_coding
  ENSMUST00000136442 Ddx51-003 110655137-110655905 retained_intron
  ENSMUST00000136629 Ddx51-002 110653546-110655145 retained_intron
  ENSMUST00000143087 Ddx51-004 110656635-110657110 retained_intron
  ENSMUST00000148773 Ddx51-005 110656862-110657871 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031478ENSMUST00000136629ENSMUST00000148773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031478 3.767±0.61 10.065±1.61 3.178±0.68 6.229±0.50 4.255±2.36 4.243±1.30 2.221±0.41 3.137±0.49 4.226±1.70 5.109±0.62 0.800±0.13 8.957±3.93 2.561±1.43 5.297±3.10
ENSMUST00000136629 N/A N/A N/A 3.720±0.00 N/A N/A N/A N/A N/A N/A N/A 5.145±0.00 3.828±1.55 4.056±0.00
ENSMUST00000148773 N/A N/A N/A 6.085±0.00 N/A N/A N/A N/A N/A N/A N/A 15.597±0.00 13.436±7.00 19.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0002 VISTA 5:110598210-111198771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0006364 IEA rRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025854 ddx51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein_coding Danio_rerio
ENSG00000185163 DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein_coding Homo_sapiens

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