C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamyl-tRNA(Gln) amidotransferase, subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029536 Gatc 10090 - 5:115333242-115341178 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000139167 Gatc-001 115333242-115341178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139167 8.291±0.45 7.231±0.97 7.515±0.69 12.439±6.48 6.742±0.83 5.490±0.72 7.252±0.97 7.474±0.77 10.601±3.50 6.757±1.08 15.149±0.42 8.565±1.68 5.747±0.86 6.369±2.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906
CIL_0002ZM CIL_0002ZM_0002 CGP 5:115333242-115343569

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006450 IEA regulation of translational fidelity
GO:0030956 IEA glutamyl-tRNA(Gln) amidotransferase complex
GO:0032543 IEA mitochondrial translation
GO:0050567 IEA glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0070681 IEA glutaminyl-tRNAGln biosynthesis via transamidation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056855 GATC glutamyl-tRNA(Gln) amidotransferase, subunit C protein_coding Danio_rerio
ENSG00000111780 AL021546.6 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial {ECO:0000313|Ensembl:ENSP00000229384} protein_coding Homo_sapiens

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