C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-Coenzyme A dehydrogenase, short chain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029545 Acads 10090 - 5:115110299-115119346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031524 Acads-001 115110299-115119346 protein_coding
  ENSMUST00000131726 Acads-002 115110299-115119287 retained_intron
  ENSMUST00000141142 Acads-004 115112784-115119275 retained_intron
  ENSMUST00000150291 Acads-005 115110801-115117580 protein_coding
  ENSMUST00000153374 Acads-003 115111996-115119310 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031524ENSMUST00000131726ENSMUST00000153374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031524 99.540±35.15 151.225±14.46 25.291±3.80 6.852±3.09 63.213±33.68 141.373±23.71 115.087±4.62 106.191±11.45 79.297±46.05 22.256±0.75 38.433±2.04 55.054±14.61 35.601±13.21 4.520±1.95
ENSMUST00000131726 N/A N/A N/A 0.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.00
ENSMUST00000153374 N/A N/A N/A 1.804±0.00 N/A N/A N/A N/A N/A N/A N/A 26.170±0.00 24.430±1.98 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0004085 IEA butyryl-CoA dehydrogenase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0031966 IEA mitochondrial membrane
GO:0033539 IEA fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042594 IEA response to starvation
GO:0046359 IEA butyrate catabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0051289 IEA protein homotetramerization
GO:0051384 IEA response to glucocorticoid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030781 acads acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain protein_coding Danio_rerio
ENSG00000122971 ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain protein_coding Homo_sapiens

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