C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain, phosphoinositide interacting 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029578 Wipi2 10090 + 5:142629542-142670588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036872 Wipi2-001 142629542-142670588 protein_coding
  ENSMUST00000110778 Wipi2-003 142629593-142667487 protein_coding
  ENSMUST00000143980 Wipi2-004 142662514-142664644 retained_intron
  ENSMUST00000153936 Wipi2-002 142629591-142662709 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036872ENSMUST00000110778ENSMUST00000153936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036872 15.917±0.65 16.669±2.69 11.948±2.81 12.382±1.57 12.230±2.56 15.741±1.57 6.827±0.67 19.775±1.85 12.374±2.62 12.291±2.57 4.739±0.88 19.682±7.83 9.149±2.38 8.204±3.19
ENSMUST00000110778 11.560±0.00 20.334±12.83 6.523±0.00 5.205±0.53 11.351±2.93 10.281±2.35 5.600±0.44 17.081±3.73 9.350±2.60 7.083±0.89 3.274±0.47 12.692±4.66 9.697±2.75 12.618±7.98
ENSMUST00000153936 4.217±0.00 7.429±0.00 N/A 2.956±0.02 4.212±0.00 4.577±0.47 N/A N/A 1.601±0.00 3.558±0.00 N/A 5.223±2.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M3 CIL_0002M3_0002 CGP 5:142629542-142722490

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 ISS autophagic vacuole assembly
GO:0000407 IEA pre-autophagosomal structure
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005776 IEA autophagic vacuole
GO:0005829 ISS cytosol
GO:0032266 ISS phosphatidylinositol-3-phosphate binding
GO:0034045 ISS pre-autophagosomal structure membrane
GO:0043234 IEA protein complex
GO:0080025 ISS phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037871 wipi2 WD repeat domain, phosphoinositide interacting 2 protein_coding Danio_rerio
ENSG00000157954 WIPI2 WD repeat domain, phosphoinositide interacting 2 protein_coding Homo_sapiens

Loading