C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 46, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029650 Slc46a3 10090 - 5:147878437-147894815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031655 Slc46a3-002 147878441-147894815 protein_coding
  ENSMUST00000118527 Slc46a3-001 147878437-147894815 protein_coding
  ENSMUST00000138244 Slc46a3-003 147893881-147894815 protein_coding
  ENSMUST00000152064 Slc46a3-004 147878559-147879869 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031655ENSMUST00000118527ENSMUST00000152064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031655 3.150±0.75 9.074±1.24 5.231±0.54 0.667±0.05 6.098±3.25 2.944±0.86 1.299±0.10 4.189±1.26 8.601±4.92 5.296±0.46 2.323±0.59 2.077±0.87 0.753±0.54 0.671±0.43
ENSMUST00000118527 1.271±0.00 3.026±0.62 2.340±0.33 0.432±0.13 5.128±2.57 1.366±0.45 0.782±0.00 N/A 2.869±0.96 1.842±0.28 1.166±0.33 2.165±1.83 0.820±0.55 0.318±0.07
ENSMUST00000152064 4.418±2.81 11.749±1.53 N/A 0.812±0.45 17.439±6.71 5.683±0.94 2.899±0.95 5.134±1.53 9.370±4.76 6.880±1.63 N/A 6.998±1.91 0.736±0.33 0.531±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CI CIL_0004CI_0002 CGP 5:147860628-147894815
CIL_0004CJ CIL_0004CJ_0002 CGP 5:147878437-148316065

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077313 slc46a3 solute carrier family 46, member 3 protein_coding Danio_rerio
ENSDARG00000079933 SLC46A3 (2 of 2) solute carrier family 46, member 3 protein_coding Danio_rerio
ENSG00000139508 SLC46A3 solute carrier family 46, member 3 protein_coding Homo_sapiens

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