C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: distal-less homeobox 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029754 Dlx6 10090 + 6:6863334-6868568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031768 Dlx6-002 6863797-6867967 protein_coding
  ENSMUST00000160937 Dlx6-001 6863334-6868568 protein_coding
  ENSMUST00000171311 Dlx6-201 6863334-6867970 protein_coding
  ENSMUST00000172943 Dlx6-004 6863798-6865430 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031768ENSMUST00000160937ENSMUST00000171311
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031768 4.818±2.01 0.101±0.00 N/A N/A N/A N/A 0.014±0.00 N/A 0.007±0.00 N/A 0.079±0.00 0.780±0.51 N/A 3.310±0.82
ENSMUST00000160937 0.309±0.29 0.043±0.03 0.013±0.00 1.352±0.84 0.088±0.04 0.151±0.07 0.016±0.00 0.033±0.02 0.036±0.03 0.074±0.04 0.023±0.00 0.631±0.39 0.027±0.01 0.236±0.01
ENSMUST00000171311 0.822±0.82 N/A N/A 4.267±1.99 N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.347±0.09 0.018±0.01 1.288±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KR CIL_0007KR_0002 UCNEbase 6:6458887-6869817
CIL_0005E8 CIL_0005E8_0002 CGP 6:6557294-6868568
CIL_0008VC CIL_0008VC_0002 VISTA 6:6561655-7162377
CIL_0005LA CIL_0005LA_0003 CGP 6:6863334-6882085

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030326 IGI embryonic limb morphogenesis
GO:0030855 IGI epithelial cell differentiation
GO:0042472 IGI inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0048646 IGI anatomical structure formation involved in morphogenesis
GO:0050679 IGI positive regulation of epithelial cell proliferation
GO:0060021 IGI palate development
GO:0060322 IGI head development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042291 dlx6a distal-less homeobox gene 6a protein_coding Danio_rerio
ENSG00000006377 DLX6 distal-less homeobox 6 protein_coding Homo_sapiens

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