C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear factor, erythroid derived 2, like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029832 Nfe2l3 10090 + 6:51432670-51458768 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005103 Nfe2l3-001 51432670-51458768 protein_coding
  ENSMUST00000061507 Nfe2l3-003 51432749-51436928 processed_transcript
  ENSMUST00000160133 Nfe2l3-002 51432749-51456876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005103ENSMUST00000061507ENSMUST00000160133
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005103 1.494±1.00 0.117±0.06 19.620±3.95 2.703±1.13 1.251±0.57 0.855±0.28 0.133±0.06 0.430±0.16 0.180±0.15 1.323±0.36 0.086±0.03 0.643±0.31 0.791±0.64 0.524±0.18
ENSMUST00000061507 N/A 0.174±0.06 N/A N/A N/A 0.420±0.12 0.090±0.00 0.219±0.00 0.208±0.00 N/A N/A 0.422±0.22 N/A N/A
ENSMUST00000160133 0.038±0.00 0.060±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A 0.211±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y0 CIL_0007Y0_0002 VISTA 6:50872427-51473473
CIL_0007VE CIL_0007VE_0002 VISTA 6:50894712-51498223
CIL_0008Q3 CIL_0008Q3_0002 VISTA 6:51033774-51634476
CIL_000874 CIL_000874_0002 VISTA 6:51061843-51662696
CIL_0009DE CIL_0009DE_0002 VISTA 6:51408576-52009543
CIL_0002CP CIL_0002CP_0002 CGP 6:51432670-51469894

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IMP RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019810 nfe2l3 nuclear factor (erythroid-derived 2)-like 3 protein_coding Danio_rerio
ENSG00000050344 NFE2L3 nuclear factor, erythroid 2-like 3 protein_coding Homo_sapiens

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