C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: annexin A4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029994 Anxa4 10090 - 6:86736840-86793584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001187 Anxa4-201 86736840-86793584 protein_coding
  ENSMUST00000113675 Anxa4-001 86736840-86765910 protein_coding
  ENSMUST00000123732 Anxa4-005 86741908-86765807 protein_coding
  ENSMUST00000127152 Anxa4-003 86736847-86765824 nonsense_mediated_decay
  ENSMUST00000129772 Anxa4-002 86747471-86765910 retained_intron
  ENSMUST00000135921 Anxa4-004 86737655-86745057 retained_intron
  ENSMUST00000155456 Anxa4-006 86737728-86760737 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001187ENSMUST00000113675ENSMUST00000123732ENSMUST00000127152ENSMUST00000129772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001187 28.370±3.69 13.621±4.34 61.195±6.38 1.104±0.27 22.889±3.11 76.287±8.06 7.150±0.47 32.035±2.51 14.318±3.95 65.642±2.33 4.562±0.39 34.922±6.81 111.266±33.53 3.010±0.56
ENSMUST00000113675 N/A 11.329±1.86 N/A N/A N/A N/A N/A 4.561±0.00 5.556±1.98 N/A N/A N/A N/A N/A
ENSMUST00000123732 N/A N/A N/A 2.320±0.00 N/A N/A N/A N/A N/A N/A N/A 61.245±0.00 254.123±11.47 9.443±0.00
ENSMUST00000127152 N/A 1.899±0.43 N/A N/A N/A N/A 2.096±0.00 3.741±0.00 N/A N/A 0.641±0.07 3.004±0.00 N/A 0.548±0.14
ENSMUST00000129772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.646±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 ISA kidney development
GO:0005509 IEA calcium ion binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0009986 IEA cell surface
GO:0012506 IEA vesicle membrane
GO:0016324 ISA apical plasma membrane
GO:0030855 IEA epithelial cell differentiation
GO:0031965 IEA nuclear membrane
GO:0032088 IEA negative regulation of NF-kappaB transcription factor activity
GO:0042802 IEA identical protein binding
GO:0048306 IEA calcium-dependent protein binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051059 IEA NF-kappaB binding
GO:0070062 IEA extracellular vesicular exosome
GO:2000483 IEA negative regulation of interleukin-8 secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036456 anxa4 annexin A4 protein_coding Danio_rerio
ENSG00000196975 ANXA4 annexin A4 protein_coding Homo_sapiens

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