C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microfibrillar associated protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030116 Mfap5 10090 + 6:122505845-122529290 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032210 Mfap5-006 122513583-122528766 protein_coding
  ENSMUST00000118626 Mfap5-005 122513659-122528632 protein_coding
  ENSMUST00000121656 Mfap5-007 122513676-122528632 protein_coding
  ENSMUST00000125728 Mfap5-003 122505845-122515375 protein_coding
  ENSMUST00000126357 Mfap5-002 122522499-122528635 retained_intron
  ENSMUST00000142896 Mfap5-004 122513676-122528338 protein_coding
  ENSMUST00000148517 Mfap5-001 122513583-122529290 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032210ENSMUST00000118626ENSMUST00000125728ENSMUST00000126357ENSMUST00000142896ENSMUST00000148517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032210 N/A N/A 7.959±1.73 N/A N/A 4.603±0.37 4.748±0.02 0.784±0.03 0.100±0.06 8.642±0.79 1.418±0.28 5.344±1.99 4.423±2.00 1.286±0.00
ENSMUST00000118626 71.518±2.13 18.234±1.64 15.031±1.09 0.339±0.06 65.842±15.72 22.814±3.39 18.406±4.79 4.278±0.36 0.124±0.09 28.241±4.10 2.988±0.73 19.753±9.88 16.461±8.15 2.414±1.37
ENSMUST00000125728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.732±0.00 32.246±4.54 N/A
ENSMUST00000126357 N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.01 N/A 0.405±0.01 0.881±0.22 N/A 0.190±0.15
ENSMUST00000142896 92.053±31.36 N/A N/A 0.134±0.00 117.355±35.87 13.543±2.46 19.547±1.57 3.585±1.04 0.264±0.16 23.017±4.04 N/A 22.970±3.98 N/A 2.159±0.32
ENSMUST00000148517 44.435±11.61 4.336±1.10 12.295±2.65 0.503±0.02 35.346±1.81 7.891±2.37 9.407±0.46 1.171±0.29 0.097±0.09 19.894±3.58 3.119±0.62 17.085±6.67 5.228±1.94 1.275±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0002 VISTA 6:122092605-122696323

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001527 TAS microfibril
GO:0030023 TAS extracellular matrix constituent conferring elasticity
GO:0031012 IDA extracellular matrix
GO:0043206 IDA extracellular fibril organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090560 mfap5 microfibrillar associated protein 5 protein_coding Danio_rerio
ENSG00000197614 MFAP5 microfibrillar associated protein 5 protein_coding Homo_sapiens

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