Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	leucine rich repeat and fibronectin type III domain containing 1
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000030600	Lrfn1	10090	+	7:28451980-28468242	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000055110		Lrfn1-201	28458658-28462067	protein_coding
	ENSMUST00000108288		Lrfn1-003	28458658-28468242	protein_coding
	ENSMUST00000189877		Lrfn1-001	28452148-28462132	protein_coding
	ENSMUST00000190954		Lrfn1-004	28451980-28459285	protein_coding
	ENSMUST00000191267		Lrfn1-002	28452238-28460411	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000055110	N/A	N/A	N/A	0.875±0.04	0.688±0.02	N/A	N/A	0.053±0.00	N/A	0.040±0.01	3.121±0.00	N/A	N/A
ENSMUST00000108288	0.714±0.49	3.938±1.07	13.434±5.78	0.921±0.38	0.595±0.24	0.178±0.00	0.230±0.00	0.145±0.08	0.684±0.36	0.053±0.03	5.513±1.97	0.482±0.24	0.176±0.15
ENSMUST00000190954	1.246±0.65	3.426±0.00	13.026±0.00	1.888±0.00	N/A	0.181±0.00	N/A	0.079±0.01	1.523±0.40	N/A	6.081±0.36	0.615±0.01	N/A
ENSMUST00000191267	0.370±0.17	N/A	N/A	0.225±0.00	N/A	0.050±0.00	N/A	0.092±0.00	N/A	N/A	0.643±0.00	0.156±0.00	0.061±0.00

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0016021	IEA	integral component of membrane
GO:0030054	IEA	cell junction
GO:0045211	IEA	postsynaptic membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000027602	mb21d2b	Mab-21 domain containing 2b	protein_coding	Danio_rerio
ENSG00000128011	LRFN1	leucine rich repeat and fibronectin type III domain containing 1	protein_coding	Homo_sapiens

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