C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030611 Mrps11 10090 + 7:78783119-78792989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032840 Mrps11-001 78783119-78792989 protein_coding
  ENSMUST00000123706 Mrps11-003 78783313-78791236 retained_intron
  ENSMUST00000132922 Mrps11-005 78783371-78789305 retained_intron
  ENSMUST00000133304 Mrps11-004 78783355-78789413 retained_intron
  ENSMUST00000133553 Mrps11-002 78783359-78792987 processed_transcript
  ENSMUST00000136001 Mrps11-006 78783370-78790923 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032840ENSMUST00000123706ENSMUST00000133553ENSMUST00000136001
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032840 8.497±3.40 13.358±5.46 7.637±2.94 10.259±3.45 6.570±2.12 11.561±1.98 7.990±3.49 14.836±3.30 12.501±6.96 5.066±0.55 7.816±1.75 15.389±5.99 13.547±5.28 12.501±1.29
ENSMUST00000123706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.783±0.00 N/A N/A
ENSMUST00000133553 5.625±1.29 21.292±0.00 5.983±1.00 11.110±1.03 5.003±1.00 8.912±0.00 N/A 8.017±0.89 9.042±4.16 4.953±0.00 6.790±1.91 16.484±5.70 9.871±3.26 7.228±1.72
ENSMUST00000136001 14.029±3.99 15.690±1.63 7.019±0.00 13.458±3.03 6.939±0.88 N/A 12.035±1.34 10.381±0.01 10.586±4.84 6.262±0.46 N/A 20.953±6.14 9.540±0.00 12.102±4.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AZ CIL_0001AZ_0002 CGP 7:78192362-78783531
CIL_00011G CIL_00011G_0002 CGP 7:78775236-78792989
CIL_00011H CIL_00011H_0002 CGP 7:78783119-78847236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 ISO mitochondrial small ribosomal subunit
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075129 mrps11 mitochondrial ribosomal protein S11 protein_coding Danio_rerio
ENSG00000181991 MRPS11 mitochondrial ribosomal protein S11 protein_coding Homo_sapiens

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