C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xylosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030657 Xylt1 10090 + 7:117380979-117667751 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032892 Xylt1-001 117380979-117667751 protein_coding
  ENSMUST00000160035 Xylt1-002 117380979-117635185 retained_intron
  ENSMUST00000161889 Xylt1-003 117475492-117549359 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032892ENSMUST00000160035ENSMUST00000161889
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032892 0.474±0.07 1.835±0.46 N/A 2.224±1.15 2.577±1.15 0.456±0.12 1.721±0.79 0.054±0.02 1.096±0.42 0.693±0.22 2.615±0.73 N/A 0.488±0.23
ENSMUST00000160035 N/A N/A 4.554±0.00 N/A N/A 0.124±0.01 N/A 0.046±0.02 N/A N/A 0.722±0.26 2.336±0.00 0.073±0.00
ENSMUST00000161889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.393±0.00 0.352±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RL CIL_0008RL_0002 VISTA 7:116942693-117544007
CIL_0003QM CIL_0003QM_0002 CGP 7:117380979-118116186

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0006024 IEA glycosaminoglycan biosynthetic process
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0030158 IEA protein xylosyltransferase activity
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061248 xylt1 xylosyltransferase I protein_coding Danio_rerio
ENSG00000103489 XYLT1 xylosyltransferase I protein_coding Homo_sapiens

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