C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700007K09 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030858 1700007K09Rik 10090 - 7:131325944-131329516 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033146 1700007K09Rik-201 131326099-131327325 protein_coding
  ENSMUST00000188899 1700007K09Rik-001 131325944-131329516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033146ENSMUST00000188899
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033146 N/A N/A 0.083±0.00 0.551±0.31 0.200±0.01 0.444±0.54 0.545±0.33 N/A N/A N/A 170.328±8.70
ENSMUST00000188899 0.080±0.00 0.014±0.00 0.055±0.00 N/A 0.100±0.04 0.091±0.04 N/A 0.078±0.02 0.055±0.00 0.075±0.00 54.245±22.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0008DB CIL_0008DB_0002 VISTA 7:131163946-131765852
CIL_0009A3 CIL_0009A3_0002 VISTA 7:131196657-131797909
CIL_0007QE CIL_0007QE_0002 VISTA 7:131249727-131851322
CIL_0001BG CIL_0001BG_0002 CGP 7:131308554-131329516
CIL_0001BF CIL_0001BF_0002 CGP 7:131325944-131336716

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000203795 FAM24A family with sequence similarity 24, member A protein_coding Homo_sapiens
ENSG00000213185 FAM24B family with sequence similarity 24, member B protein_coding Homo_sapiens

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