C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynactin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030868 Dctn5 10090 + 7:122133041-122149044 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033156 Dctn5-001 122133041-122149044 protein_coding
  ENSMUST00000123602 Dctn5-002 122133054-122149044 retained_intron
  ENSMUST00000176193 Dctn5-003 122133072-122135134 nonsense_mediated_decay
  ENSMUST00000176295 Dctn5-004 122143809-122148581 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033156ENSMUST00000123602
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033156 42.682±3.22 23.496±4.33 23.654±0.35 36.127±7.03 37.728±8.27 30.845±3.25 14.474±0.92 34.472±2.20 20.868±3.47 24.559±0.60 7.416±0.83 32.973±9.62 31.086±5.83 15.961±4.04
ENSMUST00000123602 5.727±1.46 6.810±1.27 6.911±1.91 8.523±1.90 8.869±1.84 9.280±1.80 2.745±0.87 2.948±0.48 4.714±2.02 10.068±1.03 0.933±0.12 10.944±3.44 4.765±0.50 1.650±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D1 CIL_0006D1_0002 CGP 7:122107262-122149044
CIL_0006D0 CIL_0006D0_0002 CGP 7:122133041-122169875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003573 dctn5 dynactin 5 protein_coding Danio_rerio
ENSG00000166847 DCTN5 dynactin 5 (p25) protein_coding Homo_sapiens

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