C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-terminal binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030970 Ctbp2 10090 - 7:132987563-133124354 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033269 Ctbp2-001 132987621-133123367 protein_coding
  ENSMUST00000155996 Ctbp2-015 133025720-133111791 protein_coding
  ENSMUST00000163601 Ctbp2-019 133014657-133123346 protein_coding
  ENSMUST00000164739 Ctbp2-014 133014836-133030116 processed_transcript
  ENSMUST00000164896 Ctbp2-007 133014854-133123770 processed_transcript
  ENSMUST00000165457 Ctbp2-003 132987563-133015490 nonsense_mediated_decay
  ENSMUST00000165534 Ctbp2-011 133014467-133123348 processed_transcript
  ENSMUST00000166400 Ctbp2-008 133014467-133123472 processed_transcript
  ENSMUST00000166439 Ctbp2-002 132987584-133123166 protein_coding
  ENSMUST00000167218 Ctbp2-010 133015122-133122615 protein_coding
  ENSMUST00000168238 Ctbp2-017 133081517-133123184 retained_intron
  ENSMUST00000168762 Ctbp2-006 133043718-133123856 processed_transcript
  ENSMUST00000168958 Ctbp2-018 132991727-133023757 protein_coding
  ENSMUST00000169570 Ctbp2-004 132987578-133015248 protein_coding
  ENSMUST00000170459 Ctbp2-009 133015164-133123425 protein_coding
  ENSMUST00000171022 Ctbp2-016 133025721-133123312 protein_coding
  ENSMUST00000171727 Ctbp2-013 133014731-133112699 processed_transcript
  ENSMUST00000171882 Ctbp2-020 133025702-133124354 protein_coding
  ENSMUST00000171968 Ctbp2-005 133025764-133123856 protein_coding
  ENSMUST00000172341 Ctbp2-012 132995194-133122200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033269ENSMUST00000166439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033269 12.436±6.23 10.241±1.01 22.181±4.88 28.310±0.73 8.276±0.77 19.342±3.01 4.991±0.27 11.677±0.85 3.315±0.81 11.912±0.00 3.443±0.51 20.373±3.84 15.452±4.63 7.468±1.36
ENSMUST00000166439 24.165±10.67 22.726±3.79 20.084±3.77 24.534±10.76 16.362±4.86 20.415±4.70 5.853±0.55 19.866±4.48 3.964±0.54 32.245±4.84 2.387±0.28 33.554±3.87 22.033±15.49 17.500±6.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00084V CIL_00084V_0002 VISTA 7:132507589-133108550
CIL_0009BC CIL_0009BC_0002 VISTA 7:132889780-133490441
CIL_0003UU CIL_0003UU_0002 CGP 7:132931142-133124354
CIL_0007P4 CIL_0007P4_0002 UCNEbase 7:132987258-133190227
CIL_0001V4 CIL_0001V4_0002 CGP 7:132987563-133602115

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0003713 IGI transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0017053 IDA transcriptional repressor complex
GO:0030054 IEA cell junction
GO:0035563 IMP positive regulation of chromatin binding
GO:0042974 IPI retinoic acid receptor binding
GO:0045202 IDA synapse
GO:0045892 IPI negative regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048386 IMP positive regulation of retinoic acid receptor signaling pathway
GO:0050872 IDA white fat cell differentiation
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075712 CTBP2 C-terminal binding protein 2 protein_coding Danio_rerio
ENSG00000175029 CTBP2 C-terminal binding protein 2 protein_coding Homo_sapiens

Loading