C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031162 Gata1 10090 - X:7959260-7978071 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033502 Gata1-001 7959260-7967910 protein_coding
  ENSMUST00000125418 Gata1-002 7962440-7978071 protein_coding
  ENSMUST00000128449 Gata1-003 7963029-7964166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000033502ENSMUST00000125418ENSMUST00000128449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000033502 0.234±0.15 0.415±0.34 0.106±0.02 0.117±0.02 0.587±0.06 0.037±0.02 0.113±0.05 0.031±0.01 53.672±48.10 0.599±0.22 1.391±0.98 4.405±2.47 2.921±1.25
ENSMUST00000125418 N/A 0.375±0.43 N/A N/A N/A N/A N/A 0.078±0.04 N/A 0.281±0.00 3.559±0.95 N/A N/A
ENSMUST00000128449 N/A 0.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029K CIL_00029K_0002 CGP X:7930120-7978071

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0001158 IDA enhancer sequence-specific DNA binding
GO:0001701 IMP in utero embryonic development
GO:0002039 IPI p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007267 IMP cell-cell signaling
GO:0008270 IEA zinc ion binding
GO:0008285 IMP negative regulation of cell proliferation
GO:0008301 IDA DNA binding, bending
GO:0008584 IEA male gonad development
GO:0010559 IMP regulation of glycoprotein biosynthetic process
GO:0010724 IDA regulation of definitive erythrocyte differentiation
GO:0017053 IEA transcriptional repressor complex
GO:0030099 IMP myeloid cell differentiation
GO:0030218 IMP erythrocyte differentiation
GO:0030219 IGI megakaryocyte differentiation
GO:0030220 IMP platelet formation
GO:0030221 IEA basophil differentiation
GO:0030222 IEA eosinophil differentiation
GO:0030502 IMP negative regulation of bone mineralization
GO:0031490 ISS chromatin DNA binding
GO:0033690 IMP positive regulation of osteoblast proliferation
GO:0035162 IMP embryonic hemopoiesis
GO:0035854 IEA eosinophil fate commitment
GO:0043066 IMP negative regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045648 IEA positive regulation of erythrocyte differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048468 IMP cell development
GO:0048821 IEA erythrocyte development
GO:0050731 IMP positive regulation of peptidyl-tyrosine phosphorylation
GO:0070527 IMP platelet aggregation
GO:0070742 IEA C2H2 zinc finger domain binding
GO:0071733 IDA transcriptional activation by promoter-enhancer looping
GO:0097028 IDA dendritic cell differentiation
GO:0097067 IEA cellular response to thyroid hormone stimulus
GO:2000678 IEA negative regulation of transcription regulatory region DNA binding
GO:2001240 IEA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013477 gata1a GATA binding protein 1a protein_coding Danio_rerio
ENSDARG00000059130 gata1b GATA binding protein 1b protein_coding Danio_rerio
ENSG00000102145 GATA1 GATA binding protein 1 (globin transcription factor 1) protein_coding Homo_sapiens

Loading