C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031166 Wdr13 10090 - X:8123301-8132892 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033506 Wdr13-001 8123301-8132808 protein_coding
  ENSMUST00000115623 Wdr13-005 8125408-8132820 protein_coding
  ENSMUST00000127062 Wdr13-004 8125304-8132823 nonsense_mediated_decay
  ENSMUST00000130050 Wdr13-008 8132117-8132892 processed_transcript
  ENSMUST00000130832 Wdr13-003 8123324-8132770 protein_coding
  ENSMUST00000131929 Wdr13-010 8125701-8128517 retained_intron
  ENSMUST00000133292 Wdr13-002 8123303-8132858 nonsense_mediated_decay
  ENSMUST00000148135 Wdr13-006 8128034-8132819 processed_transcript
  ENSMUST00000149257 Wdr13-007 8129718-8132511 retained_intron
  ENSMUST00000153839 Wdr13-009 8129141-8132845 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033506ENSMUST00000115623ENSMUST00000127062ENSMUST00000130832ENSMUST00000133292ENSMUST00000148135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033506 6.146±2.34 9.111±1.44 15.153±0.44 29.406±1.67 4.214±0.60 5.965±0.37 7.609±2.27 4.582±1.29 2.957±0.94 7.849±0.00 1.782±0.36 9.971±3.84 2.309±1.01 2.975±0.36
ENSMUST00000115623 8.475±1.07 13.207±0.00 N/A N/A 8.831±1.12 13.145±2.75 N/A 7.246±0.00 3.435±0.00 10.356±0.22 N/A 16.899±5.14 N/A 12.728±5.31
ENSMUST00000127062 8.787±2.06 10.936±2.13 N/A N/A N/A N/A N/A N/A 2.362±0.35 N/A N/A 11.774±1.39 N/A 4.963±0.22
ENSMUST00000130832 8.835±2.49 10.553±4.99 8.620±1.41 7.965±0.00 8.536±2.77 12.578±2.73 2.652±0.00 9.447±1.44 3.294±1.31 12.794±2.88 1.187±0.45 9.748±3.66 2.359±0.79 N/A
ENSMUST00000133292 N/A N/A N/A 7.756±0.00 N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A
ENSMUST00000148135 N/A 34.763±8.91 N/A N/A 25.594±6.67 29.793±11.73 N/A 18.122±0.65 6.783±1.06 24.853±3.15 N/A 46.810±6.35 N/A 15.576±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022974 wdr13 WD repeat domain 13 protein_coding Danio_rerio
ENSG00000101940 WDR13 WD repeat domain 13 protein_coding Homo_sapiens

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