C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYM-type 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031310 Zmym3 10090 - X:101404384-101420849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063577 Zmym3-001 101404384-101420849 protein_coding
  ENSMUST00000117637 Zmym3-007 101414933-101419841 protein_coding
  ENSMUST00000117901 Zmym3-002 101404384-101419798 protein_coding
  ENSMUST00000118092 Zmym3-006 101414938-101420216 protein_coding
  ENSMUST00000119699 Zmym3-005 101414958-101420364 protein_coding
  ENSMUST00000120107 Zmym3-013 101404384-101420716 protein_coding
  ENSMUST00000120201 Zmym3-008 101414930-101419809 protein_coding
  ENSMUST00000121429 Zmym3-004 101414933-101420685 protein_coding
  ENSMUST00000121520 Zmym3-003 101404384-101419914 protein_coding
  ENSMUST00000129545 Zmym3-017 101414509-101415166 retained_intron
  ENSMUST00000129561 Zmym3-010 101415015-101417373 retained_intron
  ENSMUST00000129586 Zmym3-018 101413244-101414919 retained_intron
  ENSMUST00000134005 Zmym3-016 101416383-101419860 protein_coding
  ENSMUST00000137416 Zmym3-012 101414201-101417477 processed_transcript
  ENSMUST00000141895 Zmym3-009 101414929-101417376 retained_intron
  ENSMUST00000143159 Zmym3-011 101416274-101417690 retained_intron
  ENSMUST00000147017 Zmym3-015 101416187-101419829 processed_transcript
  ENSMUST00000155040 Zmym3-014 101405979-101409734 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117901ENSMUST00000118092ENSMUST00000120201ENSMUST00000121520ENSMUST00000129586ENSMUST00000137416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117901 2.911±0.90 5.041±1.11 N/A 6.833±0.00 3.012±0.44 2.085±0.55 1.133±0.26 2.072±0.66 0.977±0.17 3.177±0.71 N/A 14.494±3.04 1.011±0.20 2.023±0.26
ENSMUST00000118092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.703±0.00 N/A
ENSMUST00000120201 N/A N/A N/A N/A N/A N/A N/A N/A 1.913±0.00 N/A 2.218±0.00 N/A N/A N/A
ENSMUST00000121520 3.966±2.22 7.353±4.72 3.629±0.10 11.719±2.48 3.718±1.02 2.384±0.92 1.613±0.30 2.513±1.37 1.615±0.87 3.547±0.47 1.840±0.48 8.435±2.89 1.606±0.35 1.880±1.31
ENSMUST00000129586 N/A 18.798±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137416 9.079±0.00 23.284±3.88 N/A N/A N/A 5.216±0.00 N/A N/A 2.378±0.23 N/A N/A 25.499±5.41 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057Q CIL_00057Q_0002 CGP X:101376378-101420849
CIL_00067U CIL_00067U_0002 CGP X:101404384-101448591

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0007010 ISS cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0022604 ISS regulation of cell morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000147130 ZMYM3 zinc finger, MYM-type 3 protein_coding Homo_sapiens

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