C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methylsterol monoxygenase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031604 Msmo1 10090 - 8:64718139-64733792 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034015 Msmo1-001 64718139-64733792 protein_coding
  ENSMUST00000132013 Msmo1-003 64718227-64733578 retained_intron
  ENSMUST00000135943 Msmo1-004 64724981-64733548 retained_intron
  ENSMUST00000140861 Msmo1-006 64718624-64721931 processed_transcript
  ENSMUST00000141021 Msmo1-005 64727650-64733548 protein_coding
  ENSMUST00000145216 Msmo1-002 64718209-64733581 processed_transcript
  ENSMUST00000147419 Msmo1-007 64723665-64731059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034015ENSMUST00000132013ENSMUST00000135943ENSMUST00000140861ENSMUST00000145216
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034015 4.543±0.46 11.528±1.84 22.272±7.52 17.309±6.88 2.847±1.52 6.798±1.75 1.505±0.25 4.944±0.51 31.298±5.17 7.077±1.93 1.578±0.46 12.173±13.10 23.309±18.05 1.871±0.69
ENSMUST00000132013 0.715±0.00 8.721±3.24 N/A N/A 1.149±0.20 5.008±1.18 N/A 0.840±0.00 N/A 2.835±0.34 N/A 5.110±1.79 N/A 0.556±0.05
ENSMUST00000135943 N/A N/A N/A N/A 0.604±0.11 N/A N/A N/A N/A N/A 0.121±0.00 1.768±0.29 N/A 0.369±0.00
ENSMUST00000140861 3.857±0.00 12.733±4.89 N/A N/A 7.397±0.00 7.495±1.28 N/A 3.621±0.00 24.935±3.72 N/A 1.211±0.00 6.640±1.44 N/A N/A
ENSMUST00000145216 3.390±1.24 N/A 12.652±0.79 11.289±4.20 5.087±0.89 8.307±2.31 1.031±0.43 3.180±0.79 24.704±6.62 11.339±3.62 0.620±0.00 20.950±10.80 8.338±5.37 2.017±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003N8 CIL_0003N8_0002 CGP 8:64592558-64733792
CIL_0006BG CIL_0006BG_0002 CGP 8:64718139-64849818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000254 IEA C-4 methylsterol oxidase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016126 IEA sterol biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055876 msmo1 methylsterol monooxygenase 1 protein_coding Danio_rerio
ENSG00000052802 MSMO1 methylsterol monooxygenase 1 protein_coding Homo_sapiens

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