C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 46, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032265 Fam46a 10090 - 9:85320439-85327348 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034802 Fam46a-002 85320439-85327124 protein_coding
  ENSMUST00000187711 Fam46a-001 85320439-85327348 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034802ENSMUST00000187711
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034802 1.562±0.69 0.734±0.22 0.785±0.00 0.727±0.38 8.615±6.65 N/A 0.752±0.41 0.333±0.16 1.526±0.49 0.930±0.15 0.364±0.12 2.416±1.67 9.323±8.68 0.145±0.07
ENSMUST00000187711 5.622±1.63 3.094±0.70 3.538±0.20 0.441±0.27 13.608±4.83 25.209±2.94 1.270±0.53 1.343±0.38 2.694±1.84 3.529±0.92 0.277±0.17 6.349±2.01 6.548±4.37 0.374±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G7 CIL_0006G7_0002 CGP 9:85320439-85749334

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0010468 IEA regulation of gene expression
GO:0030193 IEA regulation of blood coagulation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037183 FAM46A (1 of 2) family with sequence similarity 46, member A protein_coding Danio_rerio
ENSDARG00000054641 fam46a family with sequence similarity 46, member A protein_coding Danio_rerio
ENSG00000112773 FAM46A family with sequence similarity 46, member A protein_coding Homo_sapiens

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