C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUGBP, Elav-like family member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032297 Celf6 10090 + 9:59577917-59607292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034840 Celf6-001 59578337-59607292 protein_coding
  ENSMUST00000118164 Celf6-003 59589339-59606318 protein_coding
  ENSMUST00000118549 Celf6-005 59578192-59607292 protein_coding
  ENSMUST00000121266 Celf6-002 59589288-59607291 protein_coding
  ENSMUST00000129357 Celf6-006 59578192-59607292 nonsense_mediated_decay
  ENSMUST00000129728 Celf6-008 59604033-59606101 retained_intron
  ENSMUST00000143916 Celf6-004 59577917-59607292 nonsense_mediated_decay
  ENSMUST00000146503 Celf6-007 59602658-59603411 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000034840ENSMUST00000118164ENSMUST00000118549ENSMUST00000121266ENSMUST00000129357ENSMUST00000129728ENSMUST00000146503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000034840 N/A 2.663±1.11 0.060±0.02 4.738±1.39 0.016±0.00 1.145±0.15 0.080±0.00 0.084±0.03 0.020±0.01 0.024±0.00 0.075±0.04 0.006±0.00 N/A
ENSMUST00000118164 N/A 0.471±0.07 0.046±0.00 4.235±2.39 N/A 0.698±0.14 0.049±0.00 0.040±0.02 0.016±0.01 0.026±0.00 0.084±0.03 0.041±0.00 3.898±1.35
ENSMUST00000118549 N/A 0.258±0.00 0.013±0.00 N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A 2.450±0.50
ENSMUST00000121266 0.031±0.02 N/A N/A N/A 0.064±0.00 N/A 0.023±0.00 0.090±0.02 N/A 0.052±0.04 0.102±0.08 0.008±0.01 1.661±0.22
ENSMUST00000129357 N/A N/A N/A N/A N/A 0.265±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129728 0.154±0.00 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A 0.126±0.00 0.132±0.03 0.144±0.00 N/A
ENSMUST00000146503 N/A 3.707±0.00 N/A N/A N/A 2.421±0.16 N/A 0.171±0.00 N/A N/A 0.300±0.17 0.033±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001505 IMP regulation of neurotransmitter levels
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096261 CELF6 CUGBP, Elav-like family member 6 protein_coding Danio_rerio
ENSG00000140488 CELF6 CUGBP, Elav-like family member 6 protein_coding Homo_sapiens
ENSG00000273025 CELF6 CUGBP, Elav-like family member 6 protein_coding Homo_sapiens

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