C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2300009A05 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032403 2300009A05Rik 10090 - 9:63394447-63399246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000168665 2300009A05Rik-001 63394447-63399241 protein_coding
  ENSMUST00000185528 2300009A05Rik-002 63397476-63399246 retained_intron
  ENSMUST00000186165 2300009A05Rik-003 63394447-63398827 processed_transcript
  ENSMUST00000187234 2300009A05Rik-004 63394448-63398827 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000168665ENSMUST00000185528
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000168665 3.238±0.25 N/A 1.280±0.00 3.081±0.65 4.299±0.00 2.140±0.47 7.051±1.83 10.944±0.00 3.875±2.36
ENSMUST00000185528 0.624±0.06 0.710±0.00 0.244±0.00 N/A N/A 0.503±0.04 0.577±0.09 1.355±0.14 0.596±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FO CIL_0008FO_0002 VISTA 9:62808235-63410238
CIL_00098T CIL_00098T_0002 VISTA 9:62831587-63433435
CIL_0008DX CIL_0008DX_0002 VISTA 9:62876076-63477276
CIL_0007L5 CIL_0007L5_0002 UCNEbase 9:63176391-63881226
CIL_0008V3 CIL_0008V3_0002 VISTA 9:63223990-63824533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069240 C18H15orf61 chromosome 15 open reading frame 61 protein_coding Danio_rerio
ENSG00000189227 C15orf61 chromosome 15 open reading frame 61 protein_coding Homo_sapiens

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