C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nudix (nucleoside diphosphate linked moiety X)-type motif 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032565 Nudt16 10090 - 9:105128903-105131805 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035179 Nudt16-001 105129332-105131805 protein_coding
  ENSMUST00000185533 Nudt16-004 105128903-105131312 protein_coding
  ENSMUST00000186925 Nudt16-005 105130207-105131773 protein_coding
  ENSMUST00000186933 Nudt16-003 105129673-105131780 retained_intron
  ENSMUST00000190375 Nudt16-002 105129673-105131780 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035179ENSMUST00000185533ENSMUST00000186925ENSMUST00000186933ENSMUST00000190375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035179 4.555±0.27 12.802±2.58 10.971±1.77 3.238±1.56 7.768±2.23 13.418±1.98 1.252±0.52 3.577±0.54 3.419±1.28 6.099±0.67 3.416±0.91 7.425±2.37 2.362±1.35 1.133±0.22
ENSMUST00000185533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.137±0.00
ENSMUST00000186925 N/A N/A N/A 7.116±0.00 N/A N/A N/A N/A N/A N/A N/A 3.785±0.00 6.337±0.00 0.927±0.00
ENSMUST00000186933 1.544±0.15 3.871±0.63 1.970±0.00 1.596±1.10 2.672±1.27 4.027±1.15 0.849±0.07 0.730±0.08 0.723±0.12 2.678±0.60 0.550±0.00 2.807±0.73 0.520±0.27 0.583±0.28
ENSMUST00000190375 0.994±0.00 2.823±0.64 N/A 7.981±0.00 2.539±1.40 2.874±0.00 N/A 0.705±0.07 N/A 1.497±0.00 0.917±0.00 2.678±0.36 1.873±0.13 1.205±0.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0003729 ISS mRNA binding
GO:0005525 ISS GTP binding
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006382 ISS adenosine to inosine editing
GO:0006402 IMP mRNA catabolic process
GO:0006508 ISS proteolysis
GO:0008235 ISS metalloexopeptidase activity
GO:0008284 ISS positive regulation of cell proliferation
GO:0016077 ISS snoRNA catabolic process
GO:0016311 IDA dephosphorylation
GO:0030145 ISS manganese ion binding
GO:0030515 ISS snoRNA binding
GO:0035863 IGI dITP catabolic process
GO:0035870 IMP dITP diphosphatase activity
GO:0042803 ISS protein homodimerization activity
GO:0046709 ISS IDP catabolic process
GO:0050072 ISS m7G(5')pppN diphosphatase activity
GO:0050897 ISS cobalt ion binding
GO:0051276 IGI chromosome organization
GO:0090068 ISS positive regulation of cell cycle process
GO:0098519 IDA nucleotide phosphatase activity, acting on free nucleotides
GO:1901639 ISS XDP catabolic process
GO:1901640 ISS XTP binding
GO:1901641 ISS ITP binding
GO:2000233 ISS negative regulation of rRNA processing
GO:2000781 ISS positive regulation of double-strand break repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019503 zgc:103759 zgc:103759 protein_coding Danio_rerio
ENSDARG00000090001 FP015790.3 Uncharacterized protein protein_coding Danio_rerio
ENSG00000198585 NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein_coding Homo_sapiens

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