C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700025G04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032666 1700025G04Rik 10090 - 1:151852403-152090125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044581 1700025G04Rik-001 151884524-152090125 protein_coding
  ENSMUST00000121533 1700025G04Rik-003 151893237-152055292 nonsense_mediated_decay
  ENSMUST00000128433 1700025G04Rik-002 151892903-151921227 retained_intron
  ENSMUST00000187603 1700025G04Rik-004 151852403-152089970 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044581ENSMUST00000121533ENSMUST00000128433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044581 1.499±1.06 3.694±0.21 4.823±1.08 4.671±1.91 2.310±0.72 2.118±0.08 1.918±1.06 0.662±0.10 0.423±0.15 2.270±0.14 10.332±1.21 1.321±0.50 6.708±3.05 0.461±0.18
ENSMUST00000121533 N/A N/A N/A 14.745±0.00 N/A N/A N/A N/A N/A N/A N/A 7.516±0.00 53.155±22.92 11.575±9.24
ENSMUST00000128433 N/A N/A N/A N/A N/A N/A N/A N/A 0.886±0.00 N/A N/A 3.722±0.74 49.351±7.93 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029292 C2H1orf21 chromosome 1 open reading frame 21 protein_coding Danio_rerio
ENSG00000116667 C1orf21 chromosome 1 open reading frame 21 protein_coding Homo_sapiens

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