Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	RIKEN cDNA 6820408C15 gene
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000032680	6820408C15Rik	10090	+	2:152415587-152444330	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000039961		6820408C15Rik-001	152415587-152444330	protein_coding
	ENSMUST00000128737		6820408C15Rik-003	152427662-152439643	protein_coding
	ENSMUST00000153713		6820408C15Rik-002	152427635-152444329	nonsense_mediated_decay
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000039961	0.151±0.11	0.075±0.02	0.188±0.03	0.667±0.22	0.111±0.02	N/A	0.442±0.00	0.352±0.00	0.169±0.04	1.901±0.77	N/A	2.773±1.26	0.089±0.04	21.667±4.08
ENSMUST00000128737	0.054±0.00	N/A	0.133±0.00	0.951±0.00	0.160±0.00	0.159±0.01	N/A	N/A	N/A	2.865±0.78	0.084±0.00	2.969±0.31	0.068±0.03	19.957±8.62
ENSMUST00000153713	0.044±0.00	0.126±0.08	N/A	0.097±0.01	0.077±0.01	0.047±0.01	N/A	N/A	N/A	N/A	0.038±0.00	0.865±0.00	0.033±0.01	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00096R	CIL_00096R_0002	VISTA	2:152099091-152699726

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005575	ND	cellular_component
GO:0008150	ND	biological_process

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000094037	C11H20orf96	chromosome 20 open reading frame 96	protein_coding	Danio_rerio
ENSG00000196476	C20orf96	chromosome 20 open reading frame 96	protein_coding	Homo_sapiens

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