C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AA467197
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033213 AA467197 10090 + 2:122636986-122641191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047498 AA467197-001 122637850-122641191 protein_coding
  ENSMUST00000110512 AA467197-002 122637915-122641085 protein_coding
  ENSMUST00000142767 AA467197-003 122636986-122640729 protein_coding
  ENSMUST00000175727 AA467197-004 122637915-122640943 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047498ENSMUST00000110512ENSMUST00000142767ENSMUST00000175727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047498 0.387±0.06 N/A 0.207±0.13 0.059±0.04 0.120±0.05 8.344±3.17 N/A N/A 1.503±1.68 0.296±0.04 N/A 0.388±0.09 6.694±4.37 53.475±25.69
ENSMUST00000110512 0.200±0.05 N/A 0.241±0.01 0.043±0.00 0.367±0.05 19.868±2.54 0.113±0.00 0.148±0.02 0.652±0.55 0.240±0.01 0.063±0.00 N/A 4.778±3.53 24.239±9.37
ENSMUST00000142767 N/A N/A N/A N/A N/A N/A 0.087±0.00 0.064±0.03 0.036±0.01 N/A N/A 0.136±0.00 N/A 5.626±0.00
ENSMUST00000175727 N/A 0.301±0.00 N/A 0.084±0.00 0.276±0.09 15.004±5.90 N/A 0.164±0.07 N/A 0.390±0.00 0.124±0.06 0.298±0.15 1.904±1.10 6.450±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C8 CIL_0004C8_0003 CGP 2:122636986-122702663

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092903 C18H15orf48 chromosome 15 open reading frame 48 protein_coding Danio_rerio
ENSG00000166920 C15orf48 chromosome 15 open reading frame 48 protein_coding Homo_sapiens

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