C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar complex associated 4 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033294 Noc4l 10090 - 5:110648418-110653417 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042147 Noc4l-001 110648418-110653417 protein_coding
  ENSMUST00000123380 Noc4l-005 110648847-110650017 retained_intron
  ENSMUST00000124612 Noc4l-002 110651364-110653366 retained_intron
  ENSMUST00000145712 Noc4l-003 110651244-110653348 retained_intron
  ENSMUST00000150100 Noc4l-004 110651070-110653259 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042147ENSMUST00000123380ENSMUST00000150100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042147 14.006±4.40 11.176±2.24 8.261±0.27 14.569±9.91 10.860±3.30 9.307±1.95 6.205±0.97 8.551±0.76 16.345±9.68 6.722±0.26 5.677±1.35 18.415±8.04 9.579±6.14 11.467±5.59
ENSMUST00000123380 N/A 8.924±0.91 N/A 6.145±0.00 8.898±0.66 9.146±2.26 N/A 5.551±0.70 4.950±0.13 5.204±0.46 N/A 23.494±7.29 9.621±5.27 0.805±0.00
ENSMUST00000150100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0002 VISTA 5:110598210-111198771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0042254 IEA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045565 noc4l nucleolar complex associated 4 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000184967 NOC4L nucleolar complex associated 4 homolog (S. cerevisiae) protein_coding Homo_sapiens

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