C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: telomeric repeat binding factor 2, interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033430 Terf2ip 10090 + 8:112011359-112020528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052138 Terf2ip-201 112011359-112020528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052138
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052138 2.984±0.37 9.143±3.24 6.226±0.05 13.417±2.37 3.033±1.78 3.440±2.03 2.645±0.22 4.915±0.83 3.132±0.51 5.667±1.44 3.395±0.21 8.929±1.65 4.722±0.81 1.416±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YT CIL_0003YT_0002 CGP 8:111993440-112020528

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0000781 IDA chromosome, telomeric region
GO:0000783 IEA nuclear telomere cap complex
GO:0000784 IDA nuclear chromosome, telomeric region
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0010569 IMP regulation of double-strand break repair via homologous recombination
GO:0010833 IMP telomere maintenance via telomere lengthening
GO:0030870 IEA Mre11 complex
GO:0031848 IEA protection from non-homologous end joining at telomere
GO:0032205 IEA negative regulation of telomere maintenance
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0048239 IMP negative regulation of DNA recombination at telomere
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity
GO:0070198 IEA protein localization to chromosome, telomeric region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035379 terf2ip telomeric repeat binding factor 2, interacting protein protein_coding Danio_rerio
ENSG00000166848 TERF2IP telomeric repeat binding factor 2, interacting protein protein_coding Homo_sapiens

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