C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTP binding protein 6 (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033434 Gtpbp6 10090 - 5:110103975-110108197 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077220 Gtpbp6-001 110103975-110108197 protein_coding
  ENSMUST00000127628 Gtpbp6-002 110103979-110107202 retained_intron
  ENSMUST00000131774 Gtpbp6-008 110106848-110107432 retained_intron
  ENSMUST00000131918 Gtpbp6-010 110105791-110106924 retained_intron
  ENSMUST00000135409 Gtpbp6-009 110105232-110107416 protein_coding
  ENSMUST00000136722 Gtpbp6-007 110106701-110107607 retained_intron
  ENSMUST00000138507 Gtpbp6-011 110103978-110105335 retained_intron
  ENSMUST00000138881 Gtpbp6-003 110106649-110108140 retained_intron
  ENSMUST00000140538 Gtpbp6-004 110106320-110107711 protein_coding
  ENSMUST00000144162 Gtpbp6-006 110107036-110107711 retained_intron
  ENSMUST00000149227 Gtpbp6-005 110107049-110108161 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077220ENSMUST00000127628ENSMUST00000131918ENSMUST00000135409ENSMUST00000138507ENSMUST00000140538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077220 6.869±0.89 8.979±3.18 6.644±2.77 13.538±6.45 8.066±0.00 9.030±1.81 3.917±1.60 7.022±1.59 4.581±1.47 7.333±0.52 2.340±0.60 9.265±3.81 7.277±2.52 1.705±0.78
ENSMUST00000127628 11.694±3.93 14.743±4.73 9.424±4.14 30.540±10.12 16.839±7.04 12.542±2.11 3.875±1.64 7.997±1.79 5.614±1.94 16.453±1.87 1.922±0.77 13.624±7.36 6.398±2.28 1.968±0.40
ENSMUST00000131918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.440±0.53 N/A 0.497±0.00
ENSMUST00000135409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.960±2.45 N/A
ENSMUST00000138507 N/A N/A 9.974±0.00 17.048±4.83 12.936±1.03 9.052±0.33 2.830±0.00 5.153±0.45 4.744±0.00 10.729±0.00 N/A 18.500±3.18 6.529±2.05 1.342±0.50
ENSMUST00000140538 N/A N/A N/A 37.681±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z1 CIL_0005Z1_0002 CGP 5:110099969-110108197

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061091 gtpbp6 GTP binding protein 6 (putative) protein_coding Danio_rerio
ENSG00000178605 GTPBP6 GTP binding protein 6 (putative) protein_coding Homo_sapiens

Loading