C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm antigen with calponin homology and coiled-coil domains 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033444 Specc1l 10090 + 10:75212073-75312399 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040105 Specc1l-201 75229855-75312399 protein_coding
  ENSMUST00000105421 Specc1l-202 75212073-75312399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040105ENSMUST00000105421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040105 N/A 2.744±1.21 1.901±0.00 1.489±0.06 3.598±0.68 7.367±2.79 0.933±0.00 N/A 0.764±0.29 5.454±2.56 4.033±1.40 14.690±6.27 7.601±1.63 2.262±0.00
ENSMUST00000105421 8.828±2.98 6.558±1.19 11.241±0.87 10.103±1.01 6.172±1.37 7.286±1.67 5.834±0.40 6.222±0.31 2.629±0.91 24.080±3.91 5.668±2.35 11.343±1.81 5.489±3.51 3.385±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001E0 CIL_0001E0_0002 CGP 10:75060896-75312399
CIL_0006Z1 CIL_0006Z1_0003 CGP 10:75212073-75334788

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005815 IDA microtubule organizing center
GO:0005921 IEA gap junction
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0007049 IEA cell cycle
GO:0007155 ISO cell adhesion
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016477 IMP cell migration
GO:0030036 IMP actin cytoskeleton organization
GO:0030835 IDA negative regulation of actin filament depolymerization
GO:0031941 IDA filamentous actin
GO:0051301 IEA cell division
GO:0060325 ISO face morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006719 specc1la sperm antigen with calponin homology and coiled-coil domains 1-like a protein_coding Danio_rerio
ENSG00000100014 SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like protein_coding Homo_sapiens

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