C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033845 Mrpl15 10090 - 1:4773206-4785739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045689 Mrpl15-003 4774436-4785698 nonsense_mediated_decay
  ENSMUST00000115538 Mrpl15-006 4776377-4785739 processed_transcript
  ENSMUST00000130201 Mrpl15-002 4773206-4785710 protein_coding
  ENSMUST00000132625 Mrpl15-005 4783572-4785692 retained_intron
  ENSMUST00000146665 Mrpl15-004 4781221-4785739 processed_transcript
  ENSMUST00000156816 Mrpl15-001 4773211-4785739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045689ENSMUST00000115538ENSMUST00000130201ENSMUST00000132625ENSMUST00000146665ENSMUST00000156816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045689 4.718±1.22 2.292±1.05 N/A N/A 3.357±0.72 2.478±0.45 N/A 3.409±0.10 7.800±0.83 N/A 16.428±0.44 7.083±6.37 32.307±0.00 N/A
ENSMUST00000115538 8.454±1.11 1.096±0.58 16.984±0.38 12.403±1.60 6.065±2.15 7.686±3.57 15.096±2.33 10.719±2.50 21.562±7.41 5.456±0.89 35.859±2.63 7.149±6.73 33.294±11.59 15.737±5.05
ENSMUST00000130201 0.767±0.00 0.593±0.32 2.334±0.04 1.710±0.00 1.016±0.29 1.293±0.34 2.559±0.36 1.735±0.24 3.461±1.45 1.061±0.11 3.733±0.00 0.651±0.26 4.796±3.11 2.607±0.06
ENSMUST00000132625 N/A N/A N/A N/A N/A 6.338±2.02 N/A N/A N/A N/A N/A N/A N/A 11.358±0.00
ENSMUST00000146665 1.831±0.35 0.813±0.33 3.458±0.11 3.326±1.76 1.081±0.22 2.074±0.85 1.598±0.35 1.691±0.42 5.123±2.03 1.214±0.36 3.889±0.67 1.279±0.54 6.502±1.09 1.595±0.34
ENSMUST00000156816 0.773±0.35 0.253±0.13 0.825±0.00 0.955±0.09 0.423±0.10 0.478±0.17 0.585±0.14 0.609±0.08 0.987±0.31 0.437±0.08 1.898±0.00 0.458±0.15 0.639±0.33 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053S CIL_00053S_0002 CGP 1:4490928-4785739
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053V CIL_00053V_0002 CGP 1:4773206-4886770

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000002 TAS mitochondrial genome maintenance
GO:0003735 ISA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005762 ISA mitochondrial large ribosomal subunit
GO:0006412 ISA translation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041338 mrpl15 mitochondrial ribosomal protein L15 protein_coding Danio_rerio
ENSG00000137547 MRPL15 mitochondrial ribosomal protein L15 protein_coding Homo_sapiens

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