C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fancd2 opposite strand
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033963 Fancd2os 10090 - 6:113596761-113600715 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035870 Fancd2os-001 113596762-113600715 protein_coding
  ENSMUST00000125139 Fancd2os-002 113596761-113600715 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleTestisENSMUST00000035870ENSMUST00000125139
Transcript ID Kidney Muscle Testis
ENSMUST00000035870 N/A N/A 7.831±0.00
ENSMUST00000125139 0.445±0.19 0.064±0.00 12.165±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D5 CIL_0002D5_0002 CGP 6:113514874-113597017
CIL_00059I CIL_00059I_0002 CGP 6:113531682-113600715
CIL_00059J CIL_00059J_0002 CGP 6:113596761-113616948

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163705 FANCD2OS FANCD2 opposite strand protein_coding Homo_sapiens

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