C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Williams-Beuren syndrome chromosome region 17 homolog (human)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034040 Wbscr17 10090 - 5:130872082-131308078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086023 Wbscr17-001 130872082-131307918 protein_coding
  ENSMUST00000160609 Wbscr17-002 130963676-131308076 protein_coding
  ENSMUST00000160807 Wbscr17-003 131085272-131306915 retained_intron
  ENSMUST00000161228 Wbscr17-004 131150462-131307873 retained_intron
  ENSMUST00000162966 Wbscr17-005 131306850-131308078 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086023ENSMUST00000160609ENSMUST00000160807ENSMUST00000161228ENSMUST00000162966
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086023 3.155±2.63 0.716±0.08 0.808±0.14 5.586±1.96 1.230±0.32 0.737±0.18 0.812±0.19 0.151±0.02 0.018±0.02 0.665±0.14 0.546±0.14 1.640±0.88 0.069±0.06 0.438±0.10
ENSMUST00000160609 4.580±0.05 0.438±0.12 0.474±0.00 4.498±2.53 0.738±0.08 0.430±0.19 0.391±0.08 0.151±0.08 N/A 0.314±0.16 0.551±0.24 0.801±0.56 0.125±0.00 N/A
ENSMUST00000160807 N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A
ENSMUST00000161228 N/A 0.832±0.13 N/A N/A N/A 0.547±0.14 N/A 0.099±0.00 0.032±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162966 N/A 0.746±0.00 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042418 wbscr17 Williams-Beuren syndrome chromosome region 17 protein_coding Danio_rerio
ENSG00000185274 WBSCR17 Williams-Beuren syndrome chromosome region 17 protein_coding Homo_sapiens

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