C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034278 Dnajc17 10090 - 2:119172500-119208795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038439 Dnajc17-001 119172500-119208795 protein_coding
  ENSMUST00000125731 Dnajc17-002 119183865-119208782 retained_intron
  ENSMUST00000141009 Dnajc17-003 119179395-119183827 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000038439
Transcript ID Adrenal Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000038439 5.496±0.00 13.042±2.71 11.938±0.63 8.151±2.19 4.490±0.33 13.786±4.61 13.933±7.36 7.207±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070D CIL_00070D_0002 CGP 2:119167773-119208795
CIL_000793 CIL_000793_0002 CGP 2:119172500-119208795

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026561 dnajc17 DnaJ (Hsp40) homolog, subfamily C, member 17 protein_coding Danio_rerio
ENSG00000104129 DNAJC17 DnaJ (Hsp40) homolog, subfamily C, member 17 protein_coding Homo_sapiens

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