C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034459 Ifit1 10090 + 19:34640871-34650009 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102824 Ifit1-001 34640871-34650009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102824 4.869±1.49 3.715±0.37 3.866±0.02 0.105±0.07 4.641±1.47 2.229±0.50 1.595±0.06 2.926±0.58 4.069±2.66 3.711±0.99 0.457±0.06 2.679±1.00 1.554±0.90 0.089±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BE CIL_0007BE_000B CGP 19:34617049-34650009

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0009615 IMP response to virus
GO:0035457 IDA cellular response to interferon-alpha
GO:0035458 IDA cellular response to interferon-beta
GO:0045087 IEA innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSG00000204010 IFIT1B interferon-induced protein with tetratricopeptide repeats 1B protein_coding Homo_sapiens

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