C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034931 Dhx8 10090 + 11:101732919-101767358 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039152 Dhx8-001 101732950-101767358 protein_coding
  ENSMUST00000125409 Dhx8-005 101732919-101735696 retained_intron
  ENSMUST00000129741 Dhx8-002 101733041-101766807 protein_coding
  ENSMUST00000141461 Dhx8-004 101751779-101753176 retained_intron
  ENSMUST00000156842 Dhx8-003 101733029-101734439 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039152ENSMUST00000129741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039152 4.682±1.38 1.612±0.47 5.412±0.25 11.282±0.93 3.827±1.32 3.970±0.44 1.399±0.40 3.391±0.97 3.684±2.99 4.563±0.25 2.760±0.34 6.969±5.82 16.001±7.71 10.566±6.58
ENSMUST00000129741 1.765±0.00 2.023±0.60 0.957±0.00 3.250±0.62 2.986±1.13 3.587±1.50 1.881±0.46 1.402±0.20 1.784±0.45 1.602±0.28 N/A 5.438±1.54 10.251±0.00 4.095±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0002 VISTA 11:101501412-102102123
CIL_00090X CIL_00090X_0002 VISTA 11:101529827-102131014
CIL_000997 CIL_000997_0002 VISTA 11:101567301-102168287
CIL_00047L CIL_00047L_0002 CGP 11:101665541-101767358
CIL_000495 CIL_000495_0002 CGP 11:101732919-101785371

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054707 dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein_coding Danio_rerio
ENSG00000067596 DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein_coding Homo_sapiens

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