C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 106A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034947 Tmem106a 10090 + 11:101582242-101591788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039581 Tmem106a-001 101582242-101591788 protein_coding
  ENSMUST00000100403 Tmem106a-002 101582242-101591788 protein_coding
  ENSMUST00000107194 Tmem106a-004 101582257-101588940 protein_coding
  ENSMUST00000128614 Tmem106a-003 101582300-101588895 protein_coding
  ENSMUST00000128659 Tmem106a-006 101585997-101590766 processed_transcript
  ENSMUST00000143045 Tmem106a-005 101582244-101589434 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039581ENSMUST00000100403ENSMUST00000107194ENSMUST00000128614ENSMUST00000128659
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039581 15.140±4.99 2.862±0.55 6.826±0.87 0.350±0.18 10.026±1.97 6.510±0.94 1.323±0.34 47.689±5.84 3.271±0.94 6.124±0.72 0.342±0.14 2.490±0.93 24.098±8.80 3.057±0.92
ENSMUST00000100403 N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A 0.707±0.00 N/A 0.227±0.06 1.586±0.55 5.901±0.00 N/A
ENSMUST00000107194 24.871±0.00 6.265±1.69 N/A 0.623±0.00 18.712±4.29 N/A 2.447±0.20 N/A 3.739±0.86 N/A N/A 6.015±1.67 N/A 5.179±0.00
ENSMUST00000128614 N/A N/A 3.982±0.45 0.376±0.00 21.411±0.00 N/A 1.461±0.00 34.233±6.11 2.509±0.94 N/A N/A 2.183±0.00 N/A N/A
ENSMUST00000128659 8.688±2.56 5.105±1.40 3.408±0.40 0.425±0.14 9.219±1.93 7.199±1.46 1.170±0.32 27.398±7.43 2.494±0.64 4.183±0.02 0.167±0.04 3.985±0.65 17.442±10.33 1.800±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0002 VISTA 11:101501412-102102123
CIL_00090X CIL_00090X_0002 VISTA 11:101529827-102131014
CIL_0000KX CIL_0000KX_0003 CGP 11:101552149-101591788
CIL_000997 CIL_000997_0002 VISTA 11:101567301-102168287

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045075 tmem106a transmembrane protein 106A protein_coding Danio_rerio
ENSG00000184988 TMEM106A transmembrane protein 106A protein_coding Homo_sapiens

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