C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: X Kell blood group precursor related family member 6 homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035067 Xkr6 10090 + 14:63606503-63820809 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000119973 Xkr6-001 63606503-63820809 protein_coding
  ENSMUST00000120820 Xkr6-002 63795019-63820019 protein_coding
  ENSMUST00000176510 Xkr6-003 63606675-63666182 nonsense_mediated_decay
  ENSMUST00000176862 Xkr6-005 63659157-63663097 processed_transcript
  ENSMUST00000177500 Xkr6-004 63607026-63662809 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119973ENSMUST00000120820ENSMUST00000176510ENSMUST00000176862ENSMUST00000177500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119973 0.194±0.00 2.766±1.06 N/A 1.741±0.12 0.354±0.01 0.292±0.06 N/A N/A 0.131±0.00 0.161±0.01 N/A 0.355±0.09 0.393±0.08 0.390±0.00
ENSMUST00000120820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.955±0.28
ENSMUST00000176510 0.537±0.14 2.260±0.38 0.854±0.00 3.710±2.58 0.734±0.29 0.916±0.27 0.211±0.10 0.421±0.18 0.362±0.20 0.491±0.19 0.110±0.01 0.859±0.56 0.840±0.49 1.097±0.32
ENSMUST00000176862 N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A 0.214±0.00 N/A 0.716±0.00 N/A
ENSMUST00000177500 N/A N/A N/A N/A 0.953±0.05 N/A N/A N/A 0.534±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y4 CIL_0008Y4_0002 VISTA 14:63067789-63669845

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020443 XKR6 (1 of 2) XK, Kell blood group complex subunit-related family, member 6 protein_coding Danio_rerio
ENSDARG00000043410 xkr6 XK, Kell blood group complex subunit-related family, member 6 protein_coding Danio_rerio
ENSG00000171044 XKR6 XK, Kell blood group complex subunit-related family, member 6 protein_coding Homo_sapiens

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