C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUB domain containing protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035498 Cdcp1 10090 - 9:123170824-123216038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039229 Cdcp1-001 123170824-123216038 protein_coding
  ENSMUST00000140915 Cdcp1-002 123180763-123215999 retained_intron
  ENSMUST00000148158 Cdcp1-003 123173064-123178106 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039229ENSMUST00000140915ENSMUST00000148158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039229 2.634±1.84 0.049±0.02 6.380±0.46 0.088±0.05 4.387±1.07 15.382±0.66 0.066±0.04 7.238±2.39 1.156±0.90 5.415±0.30 0.023±0.01 2.310±1.08 8.150±5.91 0.147±0.12
ENSMUST00000140915 1.035±0.00 0.066±0.00 N/A N/A 1.972±0.47 4.211±0.74 0.067±0.02 N/A 0.206±0.13 1.358±0.12 0.018±0.00 2.227±0.64 N/A 0.043±0.05
ENSMUST00000148158 N/A 0.071±0.03 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.01 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W7 CIL_0001W7_0004 CGP 9:123150946-123216038
CIL_00073R CIL_00073R_0002 CGP 9:123170824-123260789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058943 cdcp1a CUB domain containing protein 1a protein_coding Danio_rerio
ENSDARG00000091644 CDCP1 (2 of 3) CUB domain containing protein 1 protein_coding Danio_rerio
ENSDARG00000091784 CABZ01049057.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000163814 CDCP1 CUB domain containing protein 1 protein_coding Homo_sapiens

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