C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035572 Dcaf10 10090 + 4:45342101-45379759 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000107798 Dcaf10-002 45342182-45374956 processed_transcript
  ENSMUST00000130821 Dcaf10-004 45342120-45370479 processed_transcript
  ENSMUST00000153803 Dcaf10-003 45370346-45375667 protein_coding
  ENSMUST00000155551 Dcaf10-001 45342101-45379759 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107798ENSMUST00000130821ENSMUST00000153803ENSMUST00000155551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107798 5.498±0.20 6.579±1.65 2.789±0.01 2.516±0.00 3.835±0.84 3.304±0.76 1.584±0.05 3.265±0.46 3.727±1.15 3.680±0.62 1.251±0.19 5.073±1.14 4.729±1.55 7.382±2.72
ENSMUST00000130821 4.878±0.00 19.768±11.61 N/A N/A 8.350±2.22 6.433±1.19 N/A N/A 2.764±0.02 5.570±1.32 N/A 9.890±3.10 N/A N/A
ENSMUST00000153803 N/A N/A N/A N/A 3.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155551 2.298±0.46 N/A 2.076±0.00 2.481±1.24 1.735±0.24 1.302±0.14 1.001±0.06 1.596±0.29 2.034±0.63 2.145±0.30 1.020±0.10 2.243±0.58 2.258±0.62 1.328±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0002 VISTA 4:45205842-45807105
CIL_0006TH CIL_0006TH_0002 CGP 4:45297127-45342732
CIL_0006TG CIL_0006TG_0002 CGP 4:45316613-45379759
CIL_0006TN CIL_0006TN_0002 CGP 4:45342101-45408766

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029600 wdr32 WD repeat domain 32 protein_coding Danio_rerio
ENSG00000122741 DCAF10 DDB1 and CUL4 associated factor 10 protein_coding Homo_sapiens

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