C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAMTS-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036040 Adamtsl2 10090 + 2:27079379-27108981 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000091233 Adamtsl2-001 27079379-27108981 protein_coding
  ENSMUST00000130600 Adamtsl2-003 27103786-27107406 retained_intron
  ENSMUST00000139633 Adamtsl2-002 27104663-27108981 retained_intron
  ENSMUST00000143246 Adamtsl2-004 27098043-27098658 processed_transcript
  ENSMUST00000169787 Adamtsl2-005 27097296-27108975 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091233ENSMUST00000130600ENSMUST00000139633ENSMUST00000169787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091233 1.704±0.81 7.179±1.05 1.175±0.36 1.426±0.54 0.382±0.14 0.863±0.11 5.699±1.15 6.111±1.01 0.986±0.69 21.890±3.56 0.142±0.09 6.479±2.74 0.291±0.05 0.087±0.00
ENSMUST00000130600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A
ENSMUST00000139633 N/A N/A N/A N/A 0.540±0.09 N/A N/A 5.061±0.00 0.515±0.38 N/A 0.375±0.25 N/A 0.458±0.11 N/A
ENSMUST00000169787 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A 0.041±0.03 0.223±0.00 0.018±0.00 0.197±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014U CIL_00014U_0002 CGP 2:27061636-27108981
CIL_00014V CIL_00014V_0002 CGP 2:27079379-27142491

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074033 adamtsl2 ADAMTS-like 2 protein_coding Danio_rerio
ENSG00000197859 ADAMTSL2 ADAMTS-like 2 protein_coding Homo_sapiens

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