C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 115, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036667 Fam115a 10090 - 6:42668002-42710072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045054 Fam115a-001 42668002-42710067 protein_coding
  ENSMUST00000045140 Fam115a-002 42671029-42693059 protein_coding
  ENSMUST00000121083 Fam115a-003 42669942-42693087 protein_coding
  ENSMUST00000141794 Fam115a-006 42690299-42693008 processed_transcript
  ENSMUST00000151021 Fam115a-004 42685239-42710071 retained_intron
  ENSMUST00000152100 Fam115a-007 42676695-42693003 retained_intron
  ENSMUST00000153952 Fam115a-005 42709097-42710072 retained_intron
  ENSMUST00000165486 Fam115a-008 42679025-42710071 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045054ENSMUST00000045140ENSMUST00000121083ENSMUST00000152100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045054 N/A N/A 1.733±0.27 33.681±20.98 N/A N/A 0.463±0.05 0.560±0.00 0.298±0.15 N/A 0.227±0.11 20.599±12.42 1.415±0.38 0.270±0.12
ENSMUST00000045140 N/A N/A 1.483±0.28 6.519±0.55 0.977±0.00 0.645±0.00 0.445±0.11 N/A 0.221±0.08 1.426±0.00 0.113±0.00 N/A 0.446±0.12 N/A
ENSMUST00000121083 13.583±1.64 10.349±3.44 5.112±0.06 11.792±2.11 7.015±3.10 6.021±1.78 2.285±0.57 4.049±0.78 1.006±0.51 7.541±3.17 0.632±0.23 25.528±10.52 1.947±0.39 0.801±0.12
ENSMUST00000152100 N/A N/A N/A N/A 5.383±0.00 N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OG CIL_0006OG_0004 CGP 6:42623019-42710072
CIL_00074N CIL_00074N_0002 CGP 6:42668002-42744992

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009402 si:ch211-210b2.2 si:ch211-210b2.2 protein_coding Danio_rerio
ENSDARG00000089286 zgc:162193 zgc:162193 protein_coding Danio_rerio
ENSDARG00000095212 si:ch211-210b2.4 si:ch211-210b2.4 protein_coding Danio_rerio
ENSDARG00000096927 si:ch211-210b2.3 si:ch211-210b2.3 protein_coding Danio_rerio
ENSG00000198420 FAM115A family with sequence similarity 115, member A protein_coding Homo_sapiens

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