C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 280C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036916 Zfp280c 10090 - X:48541625-48594504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072292 Zfp280c-002 48541625-48594452 protein_coding
  ENSMUST00000076635 Zfp280c-001 48541625-48592133 protein_coding
  ENSMUST00000088898 Zfp280c-004 48541625-48594373 protein_coding
  ENSMUST00000114940 Zfp280c-003 48541626-48591761 protein_coding
  ENSMUST00000143028 Zfp280c-007 48542758-48543704 retained_intron
  ENSMUST00000149058 Zfp280c-006 48578416-48594391 processed_transcript
  ENSMUST00000150501 Zfp280c-005 48586091-48594504 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072292ENSMUST00000076635ENSMUST00000088898ENSMUST00000114940ENSMUST00000143028ENSMUST00000149058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072292 N/A 1.213±0.53 1.820±0.05 3.158±1.37 1.537±0.35 N/A 0.683±0.28 0.744±0.20 1.475±0.42 0.565±0.00 0.593±0.27 1.089±0.33 0.572±0.36 N/A
ENSMUST00000076635 0.506±0.11 N/A 1.281±0.00 2.494±1.81 N/A N/A 0.379±0.00 0.183±0.00 0.648±0.06 0.635±0.01 N/A 0.459±0.00 0.381±0.17 0.447±0.17
ENSMUST00000088898 0.640±0.00 N/A 0.976±0.00 2.156±0.00 0.862±0.00 0.665±0.29 0.405±0.03 N/A 1.000±0.15 0.798±0.00 0.525±0.20 1.686±0.40 0.214±0.06 0.314±0.01
ENSMUST00000114940 1.190±0.68 1.515±0.37 1.254±0.00 0.561±0.00 0.687±0.12 0.593±0.00 0.444±0.09 0.978±0.55 0.941±0.14 0.396±0.00 0.372±0.00 2.368±0.99 0.346±0.03 0.413±0.25
ENSMUST00000143028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.130±0.00 N/A N/A
ENSMUST00000149058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SX CIL_0000SX_0002 CGP X:48519285-48594504
CIL_0000SW CIL_0000SW_0002 CGP X:48541625-48662294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077013 znf280d zinc finger protein 280D protein_coding Danio_rerio
ENSG00000056277 ZNF280C zinc finger protein 280C protein_coding Homo_sapiens

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