C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin and Sec7 domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037126 Psd 10090 - 19:46312087-46327156 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041391 Psd-201 46312087-46327156 protein_coding
  ENSMUST00000096029 Psd-202 46312087-46327156 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverOvaryTestisENSMUST00000041391ENSMUST00000096029
Transcript ID Adrenal Brain Liver Ovary Testis
ENSMUST00000041391 2.800±0.05 25.837±9.91 1.729±0.94 5.293±1.75 2.381±2.06
ENSMUST00000096029 N/A 21.294±11.20 N/A N/A 7.226±3.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WJ CIL_0005WJ_0002 CGP 19:46152509-46312090
CIL_0001HR CIL_0001HR_0003 CGP 19:46304737-46327156
CIL_0001HS CIL_0001HS_0003 CGP 19:46312087-46330446

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005543 IEA phospholipid binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IBA cell junction
GO:0030182 IBA neuron differentiation
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0042995 IEA cell projection
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076702 PSD3 pleckstrin and Sec7 domain containing protein_coding Danio_rerio
ENSDARG00000078102 PSD (1 of 2) pleckstrin and Sec7 domain containing protein_coding Danio_rerio
ENSDARG00000090933 CABZ01075947.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000059915 PSD pleckstrin and Sec7 domain containing protein_coding Homo_sapiens

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