C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700055N04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037263 1700055N04Rik 10090 + 19:3958645-3972103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025794 1700055N04Rik-003 3965900-3970438 protein_coding
  ENSMUST00000179433 1700055N04Rik-002 3958645-3972103 protein_coding
  ENSMUST00000189124 1700055N04Rik-001 3958806-3972102 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000025794ENSMUST00000179433ENSMUST00000189124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000025794 0.271±0.14 0.204±0.07 0.193±0.00 0.043±0.00 0.191±0.13 0.085±0.04 0.785±0.19 1.974±0.97 1.554±0.83 0.052±0.03 0.133±0.06 0.058±0.02 0.953±0.44
ENSMUST00000179433 0.074±0.01 0.030±0.02 0.119±0.03 N/A 0.103±0.04 0.059±0.02 0.105±0.00 N/A 0.156±0.22 N/A 0.016±0.01 0.008±0.00 0.127±0.05
ENSMUST00000189124 0.136±0.04 0.040±0.00 0.134±0.03 0.010±0.00 0.097±0.01 0.036±0.00 0.439±0.14 0.699±0.40 0.957±0.68 0.025±0.01 0.030±0.02 0.017±0.00 0.324±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004030 IEA aldehyde dehydrogenase [NAD(P)+] activity
GO:0005575 ND cellular_component
GO:0006081 IEA cellular aldehyde metabolic process
GO:0008150 ND biological_process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013839 aldh3b1 aldehyde dehydrogenase 3 family, member B1 protein_coding Danio_rerio
ENSG00000132746 ALDH3B2 aldehyde dehydrogenase 3 family, member B2 protein_coding Homo_sapiens

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