C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: platelet-activating factor acetylhydrolase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037366 Pafah2 10090 + 4:134396320-134427413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105869 Pafah2-002 134396320-134426492 protein_coding
  ENSMUST00000105870 Pafah2-001 134397471-134427413 protein_coding
  ENSMUST00000131337 Pafah2-006 134396407-134411800 processed_transcript
  ENSMUST00000132658 Pafah2-005 134402912-134405075 protein_coding
  ENSMUST00000140888 Pafah2-003 134396370-134418072 processed_transcript
  ENSMUST00000145626 Pafah2-007 134402970-134422532 processed_transcript
  ENSMUST00000148863 Pafah2-004 134397323-134410915 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105869ENSMUST00000105870ENSMUST00000132658ENSMUST00000140888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105869 4.682±0.20 3.276±0.59 N/A 0.689±0.31 3.167±1.06 11.048±1.48 1.926±0.33 15.197±4.00 19.896±4.23 6.018±1.08 0.555±0.31 4.409±1.23 1.636±0.12 5.945±2.20
ENSMUST00000105870 5.025±0.94 1.196±0.46 9.903±6.92 0.549±0.05 2.230±1.07 9.422±0.85 1.492±0.22 21.079±9.80 21.373±10.24 7.432±1.16 N/A 3.194±1.18 10.167±5.42 5.974±0.00
ENSMUST00000132658 N/A 5.715±2.20 N/A N/A 6.948±0.39 18.482±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140888 N/A 2.984±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.794±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003847 IEA 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005737 IEA cytoplasm
GO:0016042 IEA lipid catabolic process
GO:0043066 IEA negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000158006 PAFAH2 platelet-activating factor acetylhydrolase 2, 40kDa protein_coding Homo_sapiens

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