C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037410 Tbc1d2b 10090 - 9:90202027-90270804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041767 Tbc1d2b-001 90202027-90270769 protein_coding
  ENSMUST00000128874 Tbc1d2b-002 90238280-90270771 protein_coding
  ENSMUST00000144348 Tbc1d2b-003 90229053-90270804 nonsense_mediated_decay
  ENSMUST00000144646 Tbc1d2b-004 90241163-90255927 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041767ENSMUST00000144348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041767 17.957±5.18 14.190±2.45 17.259±3.40 3.437±2.13 19.672±7.01 11.489±1.22 3.330±0.98 7.370±2.27 6.385±1.45 25.490±4.62 0.909±0.36 19.857±4.21 2.691±0.99 0.844±0.22
ENSMUST00000144348 N/A 22.237±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Y CIL_00085Y_0002 VISTA 9:90013787-90616367
CIL_0008X0 CIL_0008X0_0002 VISTA 9:90119621-90721316

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061986 tbc1d2b TBC1 domain family, member 2B protein_coding Danio_rerio
ENSG00000167202 TBC1D2B TBC1 domain family, member 2B protein_coding Homo_sapiens

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