C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tectorin alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037705 Tecta 10090 - 9:42329619-42399929 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042190 Tecta-001 42329622-42399929 protein_coding
  ENSMUST00000159603 Tecta-003 42329619-42343994 processed_transcript
  ENSMUST00000160940 Tecta-002 42329695-42399727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042190ENSMUST00000159603ENSMUST00000160940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042190 0.018±0.00 N/A N/A 0.038±0.01 N/A N/A N/A N/A 0.018±0.00 N/A N/A 0.132±0.06 0.021±0.01 0.009±0.00
ENSMUST00000159603 0.016±0.01 0.072±0.07 0.011±0.01 0.069±0.00 0.026±0.01 N/A 0.016±0.00 0.009±0.00 0.076±0.01 N/A 0.347±0.11 0.234±0.12 0.027±0.02 0.078±0.02
ENSMUST00000160940 0.011±0.01 0.023±0.01 0.006±0.00 0.032±0.01 0.024±0.02 0.025±0.01 0.009±0.00 0.014±0.01 0.040±0.04 0.016±0.01 0.038±0.01 0.155±0.08 0.017±0.01 0.050±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CG CIL_0003CG_0002 CGP 9:42329619-42507809

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 TAS extracellular matrix structural constituent
GO:0005515 IPI protein binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005886 IEA plasma membrane
GO:0007160 IEA cell-matrix adhesion
GO:0007605 TAS sensory perception of sound
GO:0031225 IEA anchored component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059558 tecta tectorin alpha protein_coding Danio_rerio
ENSG00000109927 TECTA tectorin alpha protein_coding Homo_sapiens

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