C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box and WD-40 domain protein 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037816 Fbxw17 10090 + 13:50417864-50433780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046974 Fbxw17-001 50417864-50433769 protein_coding
  ENSMUST00000176298 Fbxw17-014 50431676-50432353 retained_intron
  ENSMUST00000176424 Fbxw17-008 50417886-50430257 processed_transcript
  ENSMUST00000176470 Fbxw17-010 50431171-50432376 retained_intron
  ENSMUST00000176479 Fbxw17-002 50417886-50433780 nonsense_mediated_decay
  ENSMUST00000176508 Fbxw17-009 50429970-50432110 retained_intron
  ENSMUST00000176543 Fbxw17-013 50432185-50433763 protein_coding
  ENSMUST00000176772 Fbxw17-012 50431711-50433769 protein_coding
  ENSMUST00000176913 Fbxw17-004 50417881-50425656 nonsense_mediated_decay
  ENSMUST00000176976 Fbxw17-007 50423855-50427290 processed_transcript
  ENSMUST00000177233 Fbxw17-015 50431357-50432239 retained_intron
  ENSMUST00000177245 Fbxw17-006 50417895-50420279 retained_intron
  ENSMUST00000177541 Fbxw17-003 50431121-50433776 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046974ENSMUST00000176424ENSMUST00000176470ENSMUST00000176479ENSMUST00000176508ENSMUST00000176543ENSMUST00000176913ENSMUST00000176976ENSMUST00000177541
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046974 8.381±1.66 5.424±0.85 6.929±0.14 4.547±0.28 5.914±1.39 3.407±1.01 1.222±0.31 4.604±0.74 0.970±0.44 4.237±0.56 0.616±0.28 11.673±2.42 5.091±1.33 1.761±0.57
ENSMUST00000176424 N/A N/A N/A 2.599±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.335±0.00 N/A
ENSMUST00000176470 N/A N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A N/A 8.085±0.00 2.420±0.11 0.284±0.00
ENSMUST00000176479 N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.12 N/A 0.210±0.00 N/A N/A 0.698±0.01
ENSMUST00000176508 N/A N/A N/A N/A N/A 2.387±0.00 N/A N/A 0.466±0.00 N/A N/A N/A 3.619±0.00 N/A
ENSMUST00000176543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.948±0.00 N/A N/A N/A
ENSMUST00000176913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A
ENSMUST00000176976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A
ENSMUST00000177541 3.031±0.00 2.235±0.22 2.015±0.00 2.683±0.00 2.278±0.29 1.608±0.16 0.405±0.00 1.302±0.06 0.436±0.06 1.649±0.33 0.458±0.04 4.642±1.41 1.518±0.34 0.977±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0031146 IBA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058871 FBXW12 F-box and WD repeat domain containing 12 protein_coding Danio_rerio

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